5. Nishibori M, Hayashi T, Tsudzuki M, Yamamoto Y, Yasue H. Complete sequence of the Japanese quail (Coturnix japonica) mitochondrial genome and its genetic relationship with related species. Anim Genet 2001; 32:380–5.
https://doi.org/10.1046/j.1365-2052.2001.00795.x
7. Miao YW, Peng MS, Wu GS, et al. Chicken domestication: an updated perspective based on mitochondrial genomes. Heredity 2013; 110:277–82.
https://doi.org/10.1038/hdy.2012.83
8. A value chain analysis of Cambodian smallholders’ chicken production. Phnom Penh, Cambodia: PIN’s Executive Reports Series; 2015.
9. Sonaiya F. Smallholder family poultry as a tool to initiate rural development. In : Poultry in the 21st Century; 2007 Nov 5–7; Bangkok, Thailand.
10. Dinesh MT, Geerlings E, Sölkner J, Thea S, Thieme O, Wurzinger M. Characterization of indigenous chicken production systems in Cambodia AHB – Promoting strategies for prevention and control of HPAI. Rome, Italy: Food and Agricultural Organization of the United Nations; 2009.
11. Sun H. The local chicken value chain in Cambodia: constraints and challenges of local chicken smallholder producers. Australasian Agribusiness Perspectives 2018; 21:43–56.
12. Mtileni BJ, Muchadeyi FC, Maiwashe A, Chimonyo M, Dzama K. Conservation and utilisation of indigenous chicken genetic resources in Southern Africa. Worlds Poult Sci J 2012; 68:727–48.
https://doi.org/10.1017/S0043933912000852
13. Fathi MM, Al-Homidan I, Abou-Emera OK, Al-Moshawah A. Characterisation of Saudi native chicken breeds: a case study of morphological and productive traits. Worlds Poult Sci J 2017; 73:916–27.
https://doi.org/10.1017/S0043933917000563
14. Vathana S, Keo S. Phenotypic characteristics of four indigenous chicken breeds in Cambodia. In : Proceedings of Tropentag Conference; 2006 Oct 11–13; Bonn, Germany.
15. Di Lorenzo P, Ceccobelli S, Panella F, Attard G, Lasagna E. The role of mitochondrial DNA to determine the origin of domestic chicken. World’s Poult Sci J 2015; 71:311–8.
https://doi.org/10.1017/S0043933915000318
16. Granevitze Z, David L, Twito T, Weigend S, Feldman M, Hillel J. Phylogenetic resolution power of microsatellites and various single-nucleotide polymorphism types assessed in 10 divergent chicken populations. Anim Genet 2014; 45:87–95.
https://doi.org/10.1111/age.12088
17. Molecular genetic characterization of animal genetic resources. FAO Animal Production and Health Guidelines no 9. Rome, Italy: Food and Agriculture Organization of the United Nations; 2011.
21. Kusukawa N, Uemori T, Asada K, Kato I. Rapid and reliable protocol for direct sequencing of material amplified by the polymerase chain reaction. Biotechniques 1990; 9:66–8.
26. Darriba D, Taboada GL, Doallo R, Posada D. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 2012; 9:772
https://doi.org/10.1038/nmeth.2109
29. Nei M. Molecular evolutionary genetics. 1st edNY, USA: Columbia University Press; 1987.
31. Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, et al. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol 2017; 34:3299–302.
https://doi.org/10.1093/molbev/msx248
40. Earl DA, von Holdt BM. STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv Genet Resour 2012; 4:359–61.
https://doi.org/10.1007/s12686-011-9548-7
45. Islam MA, Osman SAM, Nishibori M. Genetic diversity of Bangladeshi native chickens based on complete sequence of mitochondrial DNA D-loop region. Br Poult Sci 2019; 60:628–37.
https://doi.org/10.1080/00071668.2019.1655708
47. Osman SAM, Nishibori M. Phylogenetic analysis of South East Asian countries chickens based on mitochondrial DNA variations. J Poult Sci 2014; 51:248–61.
https://doi.org/10.2141/jpsa.0130190
48. Cuc NTK, Simianer H, Groeneveld LF, Weigend S. Multiple maternal lineages of Vietnamese local chickens inferred by mitochondrial DNA D-loop sequences. Asian-Australas J Anim Sci 2011; 24:155–61.
https://doi.org/10.5713/ajas.2011.10155
52. Cambodia agriculture, natural resources, and rural development sector assessment, strategy, and road map. Manila, Philippines: Asian Development Bank; 2021.