WT = White coat mixed with brown, BL = Black coat mixed with brown, WS = White spotted coat separated with brown, B = Hanwoo cattle with a cuticolor nose and pure brown coat, B (a to e): B (a to e): a-e represent different degree of nose pigmentation with “a” being the lightest and “e” the darkest, Hol = Holstein animals utilized as dairy cattle in Korea, NIAS = National Institute of Animal Science in Korea.
Population1 | Sample size | HE±SD | HO±SD | Mean no. of alleles | Rt |
---|---|---|---|---|---|
WT | 28 | 0.717±0.024 | 0.711±0.020 | 6.14 | 2.69 |
BL | 26 | 0.707±0.026 | 0.698±0.021 | 6.45 | 2.67 |
WS | 11 | 0.736±0.024 | 0.715±0.030 | 5.18 | 2.75 |
B | 140 | 0.710±0.026 | 0.670±0.009 | 8.64 | 2.68 |
Ba | 59 | 0.712±0.025 | 0.700±0.013 | 7.36 | 2.68 |
Bb | 30 | 0.710±0.024 | 0.720±0.018 | 6.27 | 2.66 |
Bc | 21 | 0.717±0.023 | 0.708±0.022 | 6.14 | 2.69 |
Bd | 6 | 0.743±0.021 | 0.718±0.040 | 4.23 | 2.74 |
Be | 9 | 0.715±0.032 | 0.666±0.035 | 4.73 | 2.69 |
Hol | 69 | 0.689±0.023 | 0.683±0.012 | 6.14 | 2.57 |
Total | 399 | 0.716±0.025 | 0.699±0.022 | 6.12 | 2.68 |
1 WT = White coat mixed with brown, BL = Black coat mixed with brown, WS = White spotted coat separated with brown, B = Hanwoo cattle with a cuticolor nose and pure brown coat, B (a to e): B (a to e): a-e represent different degree of nose pigmentation with “a” being the lightest and “e” the darkest, Hol = Holstein animals utilized as dairy cattle in Korea.
Locus | WT | BL | WS | B | Ba | Bb | Bc | Bd | Be | Hol |
---|---|---|---|---|---|---|---|---|---|---|
BM1818 | 0.00 | 0.01 | −0.18 | −0.01 | 0.08 | −0.15 | 0.30 | −0.09 | −0.09 | 0.11 |
BM1824 | −0.11 | −0.09 | 0.29 | 0.03 | −0.20 | 0.04 | 0.17 | −0.33 | 0.18 | −0.01 |
BM2113 | 0.06 | 0.15 | 0.11 | 0.10* | 0.09 | 0.05 | −0.08 | 0.23 | 0.00 | 0.09 |
CSSM66 | 0.02 | −0.20 | −0.12 | −0.01 | 0.02 | −0.13 | −0.03 | 0.18 | 0.01 | 0.12* |
ETH3 | −0.06 | −0.04 | −0.03 | −0.07 | −0.09 | 0.03 | −0.21 | −0.28 | −0.08 | −0.07 |
ETH10 | −0.05 | 0.00 | −0.18 | −0.02 | −0.03 | −0.20 | 0.03 | 0.38 | −0.14 | −0.11 |
ETH152 | 0.19 | −0.15 | −0.02 | 0.05 | −0.01 | −0.04 | −0.25 | −0.40 | −0.05 | −0.02 |
ETH225 | 0.00 | −0.27 | 0.17 | 0.04 | −0.08 | −0.05 | −0.11 | 0.11 | 0.63 | −0.06 |
HEL1 | 0.00 | −0.01 | −0.15 | 0.09 | 0.11 | −0.06 | 0.03 | 0.07 | 0.32 | 0.08 |
HEL5 | 0.02 | −0.07 | −0.15 | 0.05 | −0.03 | 0.06 | 0.15 | 0.11 | 0.00 | −0.01 |
HEL9 | 0.03 | −0.05 | 0.04 | 0.02 | 0.06 | −0.09 | −0.05 | 0.20 | −0.05 | 0.03 |
ILST005 | −0.09 | −0.29 | 0.22 | 0.10 | −0.05 | −0.15 | −0.17 | 0.27 | −0.08 | 0.22 |
ILST006 | −0.14 | 0.13 | 0.08 | 0.02 | 0.11 | −0.04 | −0.13 | −0.21 | −0.40 | −0.01 |
INRA005 | −0.24 | 0.07 | −0.27 | 0.10 | 0.12 | 0.11 | −0.17 | 0.09 | −0.04 | 0.01 |
INRA023 | 0.19 | 0.08 | 0.10 | 0.02 | −0.06 | 0.00 | 0.01 | 0.04 | −0.05 | 0.02 |
INRA032 | 0.07 | 0.07 | −0.08 | 0.03 | −0.27 | −0.24 | −0.30 | −0.67 | −0.15 | 0.04 |
INRA035 | 0.53*** | 0.70*** | 1.00*** | 0.60*** | 0.68*** | 0.76*** | 0.83*** | 0.75** | 0.82*** | 0.01 |
SPS115 | −0.13 | −0.03 | 0.02 | 0.02 | −0.03 | −0.13 | −0.01 | 0.17 | −0.19 | −0.08 |
TGLA57 | 0.00 | −0.02 | 0.46* | 0.08* | 0.09 | 0.04 | 0.11 | −0.03 | 0.45*** | 0.07 |
TGLA122 | 0.05 | 0.27*** | −0.13 | 0.05 | 0.07 | −0.05 | −0.11 | 0.02 | 0.01 | −0.07 |
TGLA126 | −0.15 | 0.04 | −0.36 | 0.04 | −0.07 | −0.09 | 0.03 | −0.36 | 0.02 | −0.11 |
TGLA227 | 0.16* | 0.01 | 0.08 | 0.13*** | 0.00 | 0.12 | 0.22* | 0.23 | 0.26 | 0.03 |
All | 0.01 | 0.01 | 0.03 | 0.06*** | 0.02 | −0.02 | 0.01 | 0.03 | 0.08* | 0.01 |
WT = White coat mixed with brown, BL = Black coat mixed with brown, WS = White spotted coat separated with brown, B = Hanwoo cattle with a cuticolor nose and pure brown coat, B (a to e): B (a to e): a-e represent different degree of nose pigmentation with “a” being the lightest and “e” the darkest, Hol = Holstein animals utilized as dairy cattle in Korea.
WT | BL | WS | B | Ba | Bb | Bc | Bd | Be | Hol | |
---|---|---|---|---|---|---|---|---|---|---|
WT | - | 0.0037NS | 0.0093NS | −0.0073NS | −0.0066NS | −0.0032NS | 0.0124NS | −0.0016NS | 0.0067NS | 0.1157** |
BL | 0.0491 | - | 0.0173NS | −0.0011NS | 0.0006NS | 0.0033NS | 0.0084NS | 0.0045NS | −0.0019NS | 0.1210** |
WS | 0.0845 | 0.1033 | - | 0.0256NS | 0.0217NS | 0.0138NS | 0.0137NS | −0.0214NS | −0.0041NS | 0.0918** |
B | 0.0319 | 0.0368 | 0.0930 | - | −0.0014NS | 0.0012NS | 0.0162NS | 0.0045NS | 0.0115NS | 0.1244** |
Ba | 0.0350 | 0.0406 | 0.0971 | 0.0186 | - | 0.0030NS | 0.0148NS | 0.0073NS | 0.0140NS | 0.1180** |
Bb | 0.0519 | 0.0544 | 0.0882 | 0.0355 | 0.0440 | - | 0.0101NS | −0.0063NS | 0.0037NS | 0.1115** |
Bc | 0.0841 | 0.0692 | 0.1083 | 0.0647 | 0.0656 | 0.0660 | - | −0.0110NS | 0.0240NS | 0.1130** |
Bd | 0.1180 | 0.1232 | 0.1388 | 0.1091 | 0.1140 | 0.1057 | 0.1052 | - | −0.0142NS | 0.0983* |
Be | 0.0920 | 0.0823 | 0.1270 | 0.0883 | 0.0916 | 0.0880 | 0.1263 | 0.1387 | - | 0.1192NS |
Hol | 0.2416 | 0.2309 | 0.2305 | 0.2294 | 0.2301 | 0.2267 | 0.2365 | 0.3009 | 0.2860 | - |
WT = White coat mixed with brown, BL = Black coat mixed with brown, WS = White spotted coat separated with brown, B = Hanwoo cattle with a cuticolor nose and pure brown coat, B (a to e): B (a to e): a-e represent different degree of nose pigmentation with “a” being the lightest and “e” the darkest, Hol = Holstein animals utilized as dairy cattle in Korea.
Genetic diversity of Indonesian cattle breeds based on microsatellite markers2019 April;32(4)